STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP55437.1Fimbrial subunit type 2 precursor. (460 aa)    
Predicted Functional Partners:
AOP55436.1
Sortase A, LPXTG specific.
 
   
 0.969
AOP55438.1
Autotransporter adhesin.
 
    
0.895
AOP55513.1
Hypothetical protein.
 
     0.614
AOP55514.1
Hypothetical protein.
 
     0.592
AOP55439.1
Hypothetical protein.
       0.493
AOP55295.1
Hypothetical protein.
 
     0.472
AOP51759.1
Putative sortase.
     
 0.452
AOP55440.1
ABC transporter, ATP-binding protein.
 
     0.444
AOP55441.1
Membrane protein, putative.
 
     0.421
AOP51770.1
Hypothetical protein; FIG00447899.
 
     0.408
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.