STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP55441.1Membrane protein, putative. (389 aa)    
Predicted Functional Partners:
AOP55440.1
ABC transporter, ATP-binding protein.
  
 0.976
AOP55269.1
ABC transporter, ATP-binding protein.
  
 0.890
AOP55433.1
Putative two-component system sensor kinase.
 
     0.667
AOP55442.1
Acetyltransferase, putative.
       0.615
AOP53888.1
Acetyl-coenzyme A carboxyl transferase beta chain.
      0.543
AOP53586.1
Molybdate-binding domain of ModE.
 
     0.475
AOP55436.1
Sortase A, LPXTG specific.
 
     0.451
AOP55437.1
Fimbrial subunit type 2 precursor.
 
     0.421
AOP55439.1
Hypothetical protein.
       0.420
AOP51953.1
Putative D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing.
 
     0.407
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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