STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP55442.1Acetyltransferase, putative. (193 aa)    
Predicted Functional Partners:
AOP52566.1
GCN5-related N-acetyltransferase.
 
     0.729
AOP52658.1
GCN5-related N-acetyltransferase.
  
     0.627
AOP55440.1
ABC transporter, ATP-binding protein.
       0.615
AOP55441.1
Membrane protein, putative.
       0.615
AOP54903.1
Ribosomal-protein-S5p-alanine acetyltransferase.
 
     0.540
AOP54664.1
TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA.
  
  
 0.474
AOP54077.1
Non-ribosomal peptide synthetase, terminal component.
     
 0.465
AOP54666.1
NAD(P)HX dehydratase.
  
    0.429
AOP53761.1
Acetyltransferase, GNAT family.
     0.417
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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