STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
AOP55448.1Putative LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (339 aa)    
Predicted Functional Partners:
AOP52733.1
LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.771
AOP52447.1
LysR family transcriptional regulator YnfL; Belongs to the LysR transcriptional regulatory family.
  
     0.761
AOP52147.1
LysR family regulatory protein CidR.
  
     0.760
AOP54992.1
LysR-family transcriptional regulator.
  
     0.745
AOP52049.1
Cys regulon transcriptional activator CysB; Belongs to the LysR transcriptional regulatory family.
  
     0.734
AOP51908.1
LysR family regulatory protein CidR; Belongs to the LysR transcriptional regulatory family.
  
     0.726
AOP54854.1
Transcriptional regulator lysR family.
  
     0.722
AOP51923.1
LysR family regulatory protein CidR.
  
     0.695
AOP54890.1
LysR family transcriptional regulator YeiE.
  
     0.643
AOP55449.1
Lysine decarboxylase.
       0.554
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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