STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP55496.1Formate dehydrogenase O alpha subunit - selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1186 aa)    
Predicted Functional Partners:
AOP55495.1
Formate dehydrogenase O beta subunit.
 
 0.986
AOP55494.1
Formate dehydrogenase O putative subunit.
 
   
 0.971
AOP55487.1
Selenocysteine-specific translation elongation factor.
 
   
 0.876
AOP55488.1
L-seryl-tRNA(Sec) selenium transferase.
 
   
 0.874
selD
Selenide,water dikinase; Synthesizes selenophosphate from selenide and ATP.
 
   
 0.844
AOP53878.1
Glutamate synthase [NADPH] large chain.
  
 
 0.718
AOP53693.1
Ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit.
  
 
 0.656
AOP55498.1
Thiosulfate sulfurtransferase, rhodanese.
   
 
 0.646
fdhD
Formate dehydrogenase chain D; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
 
  
 0.637
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.620
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.