STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP55538.1Chromosome (plasmid) partitioning protein ParB. (629 aa)    
Predicted Functional Partners:
AOP55539.1
Chromosome (plasmid) partitioning protein ParA; Sporulation initiation inhibitor protein Soj.
 
 0.997
AOP54097.1
Chromosome (plasmid) partitioning protein ParA.
 
 0.946
rsmG
rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
  
 0.850
AOP53701.1
Chromosome partitioning protein.
 
 
 0.840
AOP52671.1
Cell division protein FtsK.
 
   
 0.826
AOP54209.1
Cell division protein FtsK; Belongs to the FtsK/SpoIIIE/SftA family.
 
   
 0.822
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
 
  
 0.802
AOP55541.1
RNA-binding protein Jag.
  
  
 0.787
AOP55542.1
Inner membrane protein translocase component YidC, long form.
 
    0.783
AOP54617.1
Cell division protein FtsK.
 
   
 0.732
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.