STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001661915_00729Unannotated protein. (509 aa)    
Predicted Functional Partners:
GCA_001661915_00731
Unannotated protein.
 
 0.999
GCA_001661915_00728
Unannotated protein.
 
  
 0.984
GCA_001661915_00730
Unannotated protein.
 
  
 0.913
GCA_001661915_00727
Unannotated protein.
 
  
 0.878
GCA_001661915_00726
Unannotated protein.
 
  
 0.868
GCA_001661915_01297
Unannotated protein.
    
 0.677
GCA_001661915_00187
Unannotated protein.
  
  
 0.622
GCA_001661915_01504
Unannotated protein.
  
  
 0.622
GCA_001661915_01875
Unannotated protein.
  
  
 0.622
GCA_001661915_02703
Unannotated protein.
  
  
 0.622
Your Current Organism:
Croceicoccus pelagius
NCBI taxonomy Id: 1703341
Other names: C. pelagius, CGMCC 1.15358, Croceicoccus pelagius Wu et al. 2016, Croceicoccus sp. Ery9, DSM 101479, strain Ery9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.