STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPK47961.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (106 aa)    
Predicted Functional Partners:
KPK48267.1
Phosphomannomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.686
KPK47979.1
acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family.
       0.678
KPK48266.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.645
KPK47494.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.628
KPK46493.1
acetyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.620
KPK48268.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.605
KPK47962.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.575
KPK48269.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.571
KPK47945.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.519
KPK46699.1
Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.519
Your Current Organism:
Dehalococcoidia bacterium SM23282
NCBI taxonomy Id: 1703396
Other names: D. bacterium SM23_28_2, Dehalococcoidia bacterium SM23_28_2
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