STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPK78095.1Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (945 aa)    
Predicted Functional Partners:
KPK78093.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.995
KPK78094.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.986
KPK75914.1
Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.976
KPK75970.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.939
tuf
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.912
KPK76843.1
NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.907
KPK76841.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.881
KPK75913.1
Hypothetical protein; Necessary for formate dehydrogenase activity. Belongs to the FdhE family.
 
 
 
 0.868
KPK75966.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.841
KPK74557.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.840
Your Current Organism:
Phycisphaerae bacterium SM2330
NCBI taxonomy Id: 1703411
Other names: P. bacterium SM23_30, Phycisphaerae bacterium SM23_30
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.