STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPK76206.1Sulfur relay protein TusE; Derived by automated computational analysis using gene prediction method: Protein Homology. (64 aa)    
Predicted Functional Partners:
KPK77245.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.834
mnmA
Hypothetical protein; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
    
 0.700
KPK76205.1
Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.639
KPK77360.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.575
KPK74557.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.575
KPK75909.1
Fe-S protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.413
KPK77714.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.401
KPK77721.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.401
sdhA
Part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.401
KPK74589.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.401
Your Current Organism:
Phycisphaerae bacterium SM2330
NCBI taxonomy Id: 1703411
Other names: P. bacterium SM23_30, Phycisphaerae bacterium SM23_30
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.