STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPK75832.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (144 aa)    
Predicted Functional Partners:
KPK75288.1
Homoaconitate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.810
KPK76728.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.721
KPK76705.1
Anthranilate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.620
KPK77606.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.577
KPK75831.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.568
trpF
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TrpF family.
    
  0.499
KPK76671.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.465
KPK76293.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.431
recG
Hypothetical protein; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.
    
 0.412
leuD
3-isopropylmalate dehydratase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 2 subfamily.
    
  0.400
Your Current Organism:
Phycisphaerae bacterium SM2330
NCBI taxonomy Id: 1703411
Other names: P. bacterium SM23_30, Phycisphaerae bacterium SM23_30
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.