STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OKJ45093.1XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)    
Predicted Functional Partners:
OKJ45092.1
AbaA-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.976
OKJ45091.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.901
OKJ42609.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.804
OKJ44875.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.790
OKJ29581.1
Regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.776
OKJ39113.1
S-adenosyl methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.775
OKJ45095.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.774
OKJ42784.1
RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.763
OKJ32000.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.757
OKJ37358.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.740
Your Current Organism:
Streptomyces sp. CB01580
NCBI taxonomy Id: 1703933
Other names: S. sp. CB01580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.