Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OKJ33291.1 | OKJ33293.1 | AMK22_21170 | AMK22_21180 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidase M4; Extracellular zinc metalloprotease. | 0.657 |
OKJ33291.1 | OKJ33334.1 | AMK22_21170 | AMK22_21185 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Metalloprotease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.640 |
OKJ33291.1 | leuA-2 | AMK22_21170 | AMK22_21175 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily. | 0.745 |
OKJ33293.1 | OKJ33291.1 | AMK22_21180 | AMK22_21170 | Peptidase M4; Extracellular zinc metalloprotease. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.657 |
OKJ33293.1 | OKJ33334.1 | AMK22_21180 | AMK22_21185 | Peptidase M4; Extracellular zinc metalloprotease. | Metalloprotease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.786 |
OKJ33293.1 | leuA-2 | AMK22_21180 | AMK22_21175 | Peptidase M4; Extracellular zinc metalloprotease. | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily. | 0.705 |
OKJ33334.1 | OKJ33291.1 | AMK22_21185 | AMK22_21170 | Metalloprotease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.640 |
OKJ33334.1 | OKJ33293.1 | AMK22_21185 | AMK22_21180 | Metalloprotease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptidase M4; Extracellular zinc metalloprotease. | 0.786 |
OKJ33334.1 | leuA-2 | AMK22_21185 | AMK22_21175 | Metalloprotease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily. | 0.669 |
leuA-2 | OKJ33291.1 | AMK22_21175 | AMK22_21170 | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.745 |
leuA-2 | OKJ33293.1 | AMK22_21175 | AMK22_21180 | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily. | Peptidase M4; Extracellular zinc metalloprotease. | 0.705 |
leuA-2 | OKJ33334.1 | AMK22_21175 | AMK22_21185 | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily. | Metalloprotease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.669 |