STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
citACitrate synthase; Protein involved in transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer and cellular carbohydrate metabolic process. (362 aa)    
Predicted Functional Partners:
acnA
Aconitate hydratase; Protein involved in 4 iron, 4 sulfur cluster binding and metabolic process.
 
 0.987
sucC
succinyl-CoA synthetase (ADP-forming) subunit beta; Protein involved in ATP binding, ligase activity and metabolic process.
 
 0.983
mdh
Malate dehydrogenase; Protein involved in oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor and oxidation-reduction process.
  
 0.978
pdhB
Pyruvate dehydrogenase E1 component subunit beta; Protein involved in catalytic activity and metabolic process.
  
 0.957
fumA
Protein involved in fumarate hydratase activity and generation of precursor metabolites and energy.
  
 
 0.951
fadJ
Fatty acid oxidation complex subunit alpha FadJ; Protein involved in nucleotide binding, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, coenzyme binding and oxidation-reduction process.
  
 0.914
sdhB
Succinate dehydrogenase iron-sulfur subunit; Protein involved in electron carrier activity, iron-sulfur cluster binding and oxidation-reduction process.
  
 0.896
tme
NADP-dependent malic enzyme; Protein involved in nucleotide binding, NAD binding and oxidation-reduction process.
  
 0.891
ANM10677.1
Citrate synthase protein; Protein involved in transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer and cellular carbohydrate metabolic process.
 
  
 
0.891
dme
Malic enzyme; Protein involved in nucleotide binding, NAD binding and oxidation-reduction process.
  
 0.891
Your Current Organism:
Rhizobium sp. N324
NCBI taxonomy Id: 1703969
Other names: R. sp. N324
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