STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPK33458.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (506 aa)    
Predicted Functional Partners:
KPK33286.1
Trk system potassium uptake protein TrkA-like protein 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.962
KPK33564.1
Pyruvate-flavodoxin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.629
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
       0.613
KPK32706.1
ATP synthase subunit K; Produces ATP from ADP in the presence of a proton gradient across the membrane; the K subunit is a nonenzymatic component which binds the dimeric form by interacting with the G and E subunits; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.532
atpA
ATP synthase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
    
  0.525
atpB
Hypothetical protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.
    
  0.525
KPK32704.1
ATP synthase subunit D; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.525
KPK32705.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.525
KPK32700.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.507
Your Current Organism:
Chlamydiae bacterium SM2339
NCBI taxonomy Id: 1704235
Other names: C. bacterium SM23_39, Chlamydiae bacterium SM23_39
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.