STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001462235_00103Unannotated protein. (259 aa)    
Predicted Functional Partners:
GCA_001462235_00104
Unannotated protein.
       0.777
GCA_001462235_00101
Unannotated protein.
       0.773
GCA_001462235_00102
Unannotated protein.
       0.773
GCA_001462235_00292
Unannotated protein.
     
 0.749
GCA_001462235_00379
Unannotated protein.
    
 0.721
GCA_001462235_01879
Unannotated protein.
    
  0.704
GCA_001462235_00396
Unannotated protein.
    
  0.643
GCA_001462235_00105
Unannotated protein.
       0.636
GCA_001462235_00823
Unannotated protein.
    
  0.626
GCA_001462235_00157
Unannotated protein.
   
 
  0.619
Your Current Organism:
Fibrobacteria bacterium GUT307
NCBI taxonomy Id: 1704281
Other names: F. bacterium GUT307
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.