STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001462235_00133Unannotated protein. (169 aa)    
Predicted Functional Partners:
GCA_001462235_00484
Unannotated protein.
 
 
 0.977
GCA_001462235_00432
Unannotated protein.
 
 
 0.976
GCA_001462235_00997
Unannotated protein.
 
 
 0.960
GCA_001462235_02097
Unannotated protein.
 
  
 0.923
GCA_001462235_00996
Unannotated protein.
  
 
 0.917
GCA_001462235_01876
Unannotated protein.
  
 
 0.917
GCA_001462235_01875
Unannotated protein.
  
 
 0.815
GCA_001462235_00134
Unannotated protein.
       0.773
GCA_001462235_01654
Unannotated protein.
 
  
 0.742
GCA_001462235_01491
Unannotated protein.
    
 0.731
Your Current Organism:
Fibrobacteria bacterium GUT307
NCBI taxonomy Id: 1704281
Other names: F. bacterium GUT307
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