STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001462235_00482Unannotated protein. (556 aa)    
Predicted Functional Partners:
GCA_001462235_00483
Unannotated protein.
 
 
 
0.887
GCA_001462235_00063
Unannotated protein.
    
 0.874
GCA_001462235_01737
Unannotated protein.
   
 0.828
GCA_001462235_01986
Unannotated protein.
   
  0.782
GCA_001462235_00807
Unannotated protein.
  
 0.769
GCA_001462235_02495
Unannotated protein.
    
  0.751
GCA_001462235_00815
Unannotated protein.
     
 0.749
GCA_001462235_00937
Unannotated protein.
  
 
 0.747
GCA_001462235_00209
Unannotated protein.
     
 0.735
GCA_001462235_00823
Unannotated protein.
  
  0.733
Your Current Organism:
Fibrobacteria bacterium GUT307
NCBI taxonomy Id: 1704281
Other names: F. bacterium GUT307
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