STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001462235_00580Unannotated protein. (437 aa)    
Predicted Functional Partners:
GCA_001462235_00946
Unannotated protein.
    
 0.883
GCA_001462235_02044
Unannotated protein.
  
     0.683
GCA_001462235_01980
Unannotated protein.
  
     0.664
GCA_001462235_00578
Unannotated protein.
       0.631
GCA_001462235_00579
Unannotated protein.
       0.631
GCA_001462235_00111
Unannotated protein.
  
     0.579
GCA_001462235_00581
Unannotated protein.
       0.525
GCA_001462235_00582
Unannotated protein.
       0.494
GCA_001462235_00583
Unannotated protein.
       0.494
GCA_001462235_00678
Unannotated protein.
  
     0.414
Your Current Organism:
Fibrobacteria bacterium GUT307
NCBI taxonomy Id: 1704281
Other names: F. bacterium GUT307
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