STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001462235_00916Unannotated protein. (214 aa)    
Predicted Functional Partners:
GCA_001462235_01297
Unannotated protein.
  
 
 0.848
GCA_001462235_00915
Unannotated protein.
       0.792
GCA_001462235_00917
Unannotated protein.
       0.792
GCA_001462235_02049
Unannotated protein.
    
 0.697
GCA_001462235_01677
Unannotated protein.
 
 
  0.676
GCA_001462235_00918
Unannotated protein.
       0.655
GCA_001462235_00938
Unannotated protein.
    
 0.638
GCA_001462235_01917
Unannotated protein.
  
 
 0.627
GCA_001462235_01352
Unannotated protein.
    
 0.604
GCA_001462235_02448
Unannotated protein.
     
 0.601
Your Current Organism:
Fibrobacteria bacterium GUT307
NCBI taxonomy Id: 1704281
Other names: F. bacterium GUT307
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