Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ALJ56562.1 | fur | AMD24_00384 | AMD24_00553 | Putative periplasmic iron-binding protein precursor; Belongs to the bacterial solute-binding protein 9 family. | Ferric uptake regulation protein; Belongs to the Fur family. | 0.407 |
| ALJ56562.1 | ribBA | AMD24_00384 | AMD24_00707 | Putative periplasmic iron-binding protein precursor; Belongs to the bacterial solute-binding protein 9 family. | Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.424 |
| ALJ56562.1 | rpmB | AMD24_00384 | AMD24_00702 | Putative periplasmic iron-binding protein precursor; Belongs to the bacterial solute-binding protein 9 family. | 50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | 0.562 |
| ALJ56562.1 | rpsN2 | AMD24_00384 | AMD24_00420 | Putative periplasmic iron-binding protein precursor; Belongs to the bacterial solute-binding protein 9 family. | Alternate 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | 0.558 |
| ALJ56562.1 | ylmA | AMD24_00384 | AMD24_00383 | Putative periplasmic iron-binding protein precursor; Belongs to the bacterial solute-binding protein 9 family. | Putative ABC transporter ATP-binding protein YlmA. | 0.993 |
| ALJ56562.1 | znuB | AMD24_00384 | AMD24_00382 | Putative periplasmic iron-binding protein precursor; Belongs to the bacterial solute-binding protein 9 family. | High-affinity zinc uptake system membrane protein ZnuB. | 0.990 |
| fur | ALJ56562.1 | AMD24_00553 | AMD24_00384 | Ferric uptake regulation protein; Belongs to the Fur family. | Putative periplasmic iron-binding protein precursor; Belongs to the bacterial solute-binding protein 9 family. | 0.407 |
| fur | ylmA | AMD24_00553 | AMD24_00383 | Ferric uptake regulation protein; Belongs to the Fur family. | Putative ABC transporter ATP-binding protein YlmA. | 0.540 |
| fur | znuB | AMD24_00553 | AMD24_00382 | Ferric uptake regulation protein; Belongs to the Fur family. | High-affinity zinc uptake system membrane protein ZnuB. | 0.482 |
| ribBA | ALJ56562.1 | AMD24_00707 | AMD24_00384 | Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | Putative periplasmic iron-binding protein precursor; Belongs to the bacterial solute-binding protein 9 family. | 0.424 |
| ribBA | rpmB | AMD24_00707 | AMD24_00702 | Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | 0.578 |
| rpmB | ALJ56562.1 | AMD24_00702 | AMD24_00384 | 50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | Putative periplasmic iron-binding protein precursor; Belongs to the bacterial solute-binding protein 9 family. | 0.562 |
| rpmB | ribBA | AMD24_00702 | AMD24_00707 | 50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.578 |
| rpmB | rpsN2 | AMD24_00702 | AMD24_00420 | 50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | Alternate 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | 0.992 |
| rpsN2 | ALJ56562.1 | AMD24_00420 | AMD24_00384 | Alternate 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | Putative periplasmic iron-binding protein precursor; Belongs to the bacterial solute-binding protein 9 family. | 0.558 |
| rpsN2 | rpmB | AMD24_00420 | AMD24_00702 | Alternate 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | 50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | 0.992 |
| ylmA | ALJ56562.1 | AMD24_00383 | AMD24_00384 | Putative ABC transporter ATP-binding protein YlmA. | Putative periplasmic iron-binding protein precursor; Belongs to the bacterial solute-binding protein 9 family. | 0.993 |
| ylmA | fur | AMD24_00383 | AMD24_00553 | Putative ABC transporter ATP-binding protein YlmA. | Ferric uptake regulation protein; Belongs to the Fur family. | 0.540 |
| ylmA | znuB | AMD24_00383 | AMD24_00382 | Putative ABC transporter ATP-binding protein YlmA. | High-affinity zinc uptake system membrane protein ZnuB. | 0.999 |
| znuB | ALJ56562.1 | AMD24_00382 | AMD24_00384 | High-affinity zinc uptake system membrane protein ZnuB. | Putative periplasmic iron-binding protein precursor; Belongs to the bacterial solute-binding protein 9 family. | 0.990 |
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