rapA protein (Xiphinematobacter sp. Idaho) - STRING interaction network

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Score

rapA

RNA polymerase-associated protein RapA. (793 aa)

Predicted Functional Partners:

rpoB

0.987

rpoZ

0.987

rpoA

0.985

polA

0.935

dnaN

0.916

rpoC

0.894

recA

0.838

ALJ56795.1

0.664

dnaK

0.651

eno

0.629

Your Current Organism:

Xiphinematobacter sp. Idaho

NCBI taxonomy Id: 1704307
Other names: C. Xiphinematobacter sp. Idaho Grape, Candidatus Xiphinematobacter sp. Idaho Grape

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALJ56795.1	rapA	AMD24_00628	AMD24_00629	Hypothetical protein.	RNA polymerase-associated protein RapA.	0.664
dnaK	eno	AMD24_00054	AMD24_00021	Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.	Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.	0.753
dnaK	rapA	AMD24_00054	AMD24_00629	Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.	RNA polymerase-associated protein RapA.	0.651
dnaK	recA	AMD24_00054	AMD24_00149	Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.	Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.	0.469
dnaK	rpoA	AMD24_00054	AMD24_00793	Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.549
dnaK	rpoB	AMD24_00054	AMD24_00328	Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.457
dnaK	rpoC	AMD24_00054	AMD24_00327	Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.407
dnaN	polA	AMD24_00341	AMD24_00161	DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	DNA polymerase I.	0.996
dnaN	rapA	AMD24_00341	AMD24_00629	DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	RNA polymerase-associated protein RapA.	0.916
dnaN	recA	AMD24_00341	AMD24_00149	DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.	0.750
dnaN	rpoB	AMD24_00341	AMD24_00328	DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.401
eno	dnaK	AMD24_00021	AMD24_00054	Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.	Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.	0.753
eno	rapA	AMD24_00021	AMD24_00629	Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.	RNA polymerase-associated protein RapA.	0.629
eno	rpoA	AMD24_00021	AMD24_00793	Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.763
eno	rpoB	AMD24_00021	AMD24_00328	Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.421
eno	rpoZ	AMD24_00021	AMD24_00604	Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.	DNA-directed RNA polymerase subunit omega.	0.630
polA	dnaN	AMD24_00161	AMD24_00341	DNA polymerase I.	DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	0.996
polA	rapA	AMD24_00161	AMD24_00629	DNA polymerase I.	RNA polymerase-associated protein RapA.	0.935
polA	recA	AMD24_00161	AMD24_00149	DNA polymerase I.	Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.	0.826
rapA	ALJ56795.1	AMD24_00629	AMD24_00628	RNA polymerase-associated protein RapA.	Hypothetical protein.	0.664