STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQX70840.1Sodium:alanine symporter family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (491 aa)    
Predicted Functional Partners:
AQX70841.1
Acylphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.848
smc
Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.
       0.742
ftsY
Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).
       0.735
AQX70851.1
Transcriptional regulator; Indirectly regulates nitrogen metabolism; at high nitrogen levels P-II prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.518
ffh
Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.
       0.502
glnD
[protein-PII] uridylyltransferase; Uridylylates and de-uridylylates the small trimeric protein Pii; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.498
AQX70850.1
Ammonium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.494
AQX70845.1
Na+/H+ antiporter subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.451
AQX70846.1
Cation:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.451
AQX70847.1
Sodium:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.413
Your Current Organism:
Corynebacterium stationis
NCBI taxonomy Id: 1705
Other names: ATCC 14403, Achromobacter stationis, Brevibacterium stationis, C. stationis, CCUG 43497, CIP 104228, DSM 20302, IFO 12144, JCM 11611, NBRC 12144
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