STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOP67141.1Multidrug transporter MatE; Derived by automated computational analysis using gene prediction method: Protein Homology. (449 aa)    
Predicted Functional Partners:
KOP66301.1
Ribosomal protein L7Ae-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.779
KOP67597.1
Ribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.726
KOP68094.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.711
KOP68095.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.711
KOP67607.1
Signal recognition particle; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.593
KOP65600.1
Glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.495
KOP67142.1
GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.487
KOP69264.1
Phytoene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.470
KOP68381.1
Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.470
Your Current Organism:
Bacillus sp. FJAT18019
NCBI taxonomy Id: 1705110
Other names: B. sp. FJAT-18019, Bacillus sp. FJAT-18019
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.