STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOR37737.1Monoamine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (420 aa)    
Predicted Functional Partners:
KOR37883.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.964
KOR33746.1
Histone deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.964
KOR34634.1
Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.935
KOR37808.1
Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.895
KOR36295.1
Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.895
KOR38441.1
3-phosphoglycerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.889
KOR38256.1
Phytoene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.873
KOR36442.1
Acetaldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
     
 0.815
KOR37920.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.679
KOR35827.1
DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
   
    0.674
Your Current Organism:
Planktothricoides sp. SR001
NCBI taxonomy Id: 1705388
Other names: P. sp. SR001
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