STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMQ22_01656Hydrogenase MvhADGHdrABC F420-non-reducing hydrogenase subunit B. (277 aa)    
Predicted Functional Partners:
APG08_00034
annotation not available
 
  
 0.926
hdlA
Heterodisulfide reductase subunit A-like protein.
 
   
0.846
AMQ22_01657
Dinitrogenase iron-molybdenum cofactor.
 
  
 0.802
APG08_01132
annotation not available
  
 0.726
AMQ22_01969
Hydrogenase subunit EhbL.
    
 0.666
APG08_01419
annotation not available
    
  0.650
gdhA
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
  0.629
AMQ22_01762
Hydrogenase MvhADGHdrABC CoB-CoM heterodisulfide reductase subunit B.
    
  0.628
acsA_2
Acetyl-coenzyme A synthetase.
     
 0.624
APG08_00122
annotation not available
    
  0.623
Your Current Organism:
Methanofastidiosum methylthiophilus
NCBI taxonomy Id: 1705564
Other names: Arc I group archaeon ADurb1013_Bin02101, Arc I group archaeon ADurb1113_Bin01801, Arc I group archaeon ADurb1213_Bin02801, Arc I group archaeon B03fssc0709_Meth_Bin005, Arc I group archaeon B15fssc0709_Meth_Bin003, Arc I group archaeon BMIXfssc0709_Meth_Bin006, Arc I group archaeon U1lsi0528_Bin055, Arc I group archaeon U1lsi0528_Bin089, C. Methanofastidiosum methylthiophilus, Ca. Methanofastidiosum methylthiophilus, Candidatus Methanofastidiosum methylthiophilus, WSA2 group archaeon U1lsi0528_Bin055, WSA2 group archaeon U1lsi0528_Bin089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.