STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMQ22_02235Putative ABC transporter ATP-binding protein. (254 aa)    
Predicted Functional Partners:
APG08_00093
annotation not available
 0.999
AMQ22_02103
Nickel transporter permease NikB.
 
 0.994
APG08_00092
annotation not available
 
 
 
0.986
APG08_00096
annotation not available
 
 0.983
AMQ22_01595
Arginine transporter permease subunit ArtQ.
      0.885
APG08_00763
annotation not available
  
 0.756
APG08_01340
annotation not available
  
 0.756
AMQ22_02104
Methyltransferase domain protein.
       0.732
malK_7
Trehalose/maltose import ATP-binding protein MalK.
 
  
 
0.664
malK_2
Trehalose/maltose import ATP-binding protein MalK.
 
  
 
0.663
Your Current Organism:
Methanofastidiosum methylthiophilus
NCBI taxonomy Id: 1705564
Other names: Arc I group archaeon ADurb1013_Bin02101, Arc I group archaeon ADurb1113_Bin01801, Arc I group archaeon ADurb1213_Bin02801, Arc I group archaeon B03fssc0709_Meth_Bin005, Arc I group archaeon B15fssc0709_Meth_Bin003, Arc I group archaeon BMIXfssc0709_Meth_Bin006, Arc I group archaeon U1lsi0528_Bin055, Arc I group archaeon U1lsi0528_Bin089, C. Methanofastidiosum methylthiophilus, Ca. Methanofastidiosum methylthiophilus, Candidatus Methanofastidiosum methylthiophilus, WSA2 group archaeon U1lsi0528_Bin055, WSA2 group archaeon U1lsi0528_Bin089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.