Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMQ22_00894 | AMQ22_00975 | APG08_00208 | APG08_00252 | NMD3 family protein. | OBG-type G domain-containing protein. | 0.958 |
| AMQ22_00894 | map | APG08_00208 | APG08_01049 | NMD3 family protein. | Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). | 0.864 |
| AMQ22_00894 | rpl10 | APG08_00208 | APG08_00438 | NMD3 family protein. | 50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.916 |
| AMQ22_00894 | rpl24e | APG08_00208 | APG08_00214 | NMD3 family protein. | 50S ribosomal protein L24e; Binds to the 23S rRNA. | 0.890 |
| AMQ22_00894 | rpl29 | APG08_00208 | APG08_00805 | NMD3 family protein. | 50S ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. | 0.858 |
| AMQ22_00894 | rpl30 | APG08_00208 | APG08_00791 | NMD3 family protein. | 50S ribosomal protein L30. | 0.886 |
| AMQ22_00894 | rpl40e | APG08_00208 | APG08_00203 | NMD3 family protein. | 50S ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family. | 0.918 |
| AMQ22_00894 | rpl44e | APG08_00208 | APG08_01191 | NMD3 family protein. | 50S ribosomal protein L44e; Binds to the 23S rRNA. | 0.899 |
| AMQ22_00894 | rpl7ae | APG08_00208 | APG08_00216 | NMD3 family protein. | 50S ribosomal protein L7Ae; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs. | 0.903 |
| AMQ22_00894 | rps8e | APG08_00208 | APG08_00700 | NMD3 family protein. | 30S ribosomal protein S8e. | 0.958 |
| AMQ22_00975 | AMQ22_00894 | APG08_00252 | APG08_00208 | OBG-type G domain-containing protein. | NMD3 family protein. | 0.958 |
| AMQ22_00975 | map | APG08_00252 | APG08_01049 | OBG-type G domain-containing protein. | Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). | 0.885 |
| AMQ22_00975 | rpl10 | APG08_00252 | APG08_00438 | OBG-type G domain-containing protein. | 50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.945 |
| AMQ22_00975 | rpl29 | APG08_00252 | APG08_00805 | OBG-type G domain-containing protein. | 50S ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. | 0.813 |
| AMQ22_00975 | rpl30 | APG08_00252 | APG08_00791 | OBG-type G domain-containing protein. | 50S ribosomal protein L30. | 0.969 |
| AMQ22_00975 | rpl44e | APG08_00252 | APG08_01191 | OBG-type G domain-containing protein. | 50S ribosomal protein L44e; Binds to the 23S rRNA. | 0.711 |
| AMQ22_00975 | rpl7ae | APG08_00252 | APG08_00216 | OBG-type G domain-containing protein. | 50S ribosomal protein L7Ae; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs. | 0.825 |
| AMQ22_00975 | rps8e | APG08_00252 | APG08_00700 | OBG-type G domain-containing protein. | 30S ribosomal protein S8e. | 0.999 |
| map | AMQ22_00894 | APG08_01049 | APG08_00208 | Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). | NMD3 family protein. | 0.864 |
| map | AMQ22_00975 | APG08_01049 | APG08_00252 | Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). | OBG-type G domain-containing protein. | 0.885 |
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