Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMQ22_00811 | AMQ22_01702 | APG08_00691 | APG08_00686 | Sodium:alanine symporter family protein. | Uncharacterized protein. | 0.615 |
| AMQ22_00811 | AMQ22_01703 | APG08_00691 | APG08_00685 | Sodium:alanine symporter family protein. | Iron dependent repressor, metal binding and dimerization domain. | 0.563 |
| AMQ22_00811 | AMQ22_02010 | APG08_00691 | APG08_00690 | Sodium:alanine symporter family protein. | Uncharacterized protein. | 0.758 |
| AMQ22_00811 | APG08_00688 | APG08_00691 | APG08_00688 | Sodium:alanine symporter family protein. | annotation not available | 0.760 |
| AMQ22_00811 | cofD | APG08_00691 | APG08_00689 | Sodium:alanine symporter family protein. | Phosphoenolpyruvate transferase; Catalyzes the transfer of the phosphoenolpyruvate moiety from enoylpyruvoyl-2-diphospho-5'-guanosine (EPPG) to 7,8-didemethyl-8- hydroxy-5-deazariboflavin (FO) with the formation of dehydro coenzyme F420-0 and GMP. | 0.757 |
| AMQ22_01069 | cofD | APG08_00135 | APG08_00689 | Nitroreductase A. | Phosphoenolpyruvate transferase; Catalyzes the transfer of the phosphoenolpyruvate moiety from enoylpyruvoyl-2-diphospho-5'-guanosine (EPPG) to 7,8-didemethyl-8- hydroxy-5-deazariboflavin (FO) with the formation of dehydro coenzyme F420-0 and GMP. | 0.579 |
| AMQ22_01069 | cofE | APG08_00135 | APG08_01477 | Nitroreductase A. | Coenzyme F420:L-glutamate ligase. | 0.509 |
| AMQ22_01702 | AMQ22_00811 | APG08_00686 | APG08_00691 | Uncharacterized protein. | Sodium:alanine symporter family protein. | 0.615 |
| AMQ22_01702 | AMQ22_01703 | APG08_00686 | APG08_00685 | Uncharacterized protein. | Iron dependent repressor, metal binding and dimerization domain. | 0.892 |
| AMQ22_01702 | AMQ22_02010 | APG08_00686 | APG08_00690 | Uncharacterized protein. | Uncharacterized protein. | 0.577 |
| AMQ22_01702 | APG08_00688 | APG08_00686 | APG08_00688 | Uncharacterized protein. | annotation not available | 0.574 |
| AMQ22_01702 | cofD | APG08_00686 | APG08_00689 | Uncharacterized protein. | Phosphoenolpyruvate transferase; Catalyzes the transfer of the phosphoenolpyruvate moiety from enoylpyruvoyl-2-diphospho-5'-guanosine (EPPG) to 7,8-didemethyl-8- hydroxy-5-deazariboflavin (FO) with the formation of dehydro coenzyme F420-0 and GMP. | 0.581 |
| AMQ22_01703 | AMQ22_00811 | APG08_00685 | APG08_00691 | Iron dependent repressor, metal binding and dimerization domain. | Sodium:alanine symporter family protein. | 0.563 |
| AMQ22_01703 | AMQ22_01702 | APG08_00685 | APG08_00686 | Iron dependent repressor, metal binding and dimerization domain. | Uncharacterized protein. | 0.892 |
| AMQ22_01703 | AMQ22_02010 | APG08_00685 | APG08_00690 | Iron dependent repressor, metal binding and dimerization domain. | Uncharacterized protein. | 0.567 |
| AMQ22_01703 | APG08_00688 | APG08_00685 | APG08_00688 | Iron dependent repressor, metal binding and dimerization domain. | annotation not available | 0.562 |
| AMQ22_01703 | cofD | APG08_00685 | APG08_00689 | Iron dependent repressor, metal binding and dimerization domain. | Phosphoenolpyruvate transferase; Catalyzes the transfer of the phosphoenolpyruvate moiety from enoylpyruvoyl-2-diphospho-5'-guanosine (EPPG) to 7,8-didemethyl-8- hydroxy-5-deazariboflavin (FO) with the formation of dehydro coenzyme F420-0 and GMP. | 0.627 |
| AMQ22_02010 | AMQ22_00811 | APG08_00690 | APG08_00691 | Uncharacterized protein. | Sodium:alanine symporter family protein. | 0.758 |
| AMQ22_02010 | AMQ22_01702 | APG08_00690 | APG08_00686 | Uncharacterized protein. | Uncharacterized protein. | 0.577 |
| AMQ22_02010 | AMQ22_01703 | APG08_00690 | APG08_00685 | Uncharacterized protein. | Iron dependent repressor, metal binding and dimerization domain. | 0.567 |
page 1 of 3