STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APG08_01356annotation not available (232 aa)    
Predicted Functional Partners:
AMQ22_01763
Glycolate oxidase subunit GlcD.
    
  0.774
AMQ22_01760
Methionine gamma-lyase.
    
  0.738
AMQ22_01969
Hydrogenase subunit EhbL.
    
  0.738
AMQ22_02193
Antitoxin HipB.
    
  0.738
APG08_00766
annotation not available
    
  0.733
AMQ22_00627
Hydrogenase MvhADGHdrABC F420-non-reducing hydrogenase subunit B.
    
  0.709
AMQ22_01514
Cupin_2 domain-containing protein.
 
  
  0.648
mtaA
Methylcobamide:CoM methyltransferase MtaA.
  
  
  0.618
APG08_00013
annotation not available
    
  0.593
AMQ22_01615
Molybdopterin biosynthesis-like protein MoeZ.
    
 0.579
Your Current Organism:
Methanofastidiosum methylthiophilus
NCBI taxonomy Id: 1705564
Other names: Arc I group archaeon ADurb1013_Bin02101, Arc I group archaeon ADurb1113_Bin01801, Arc I group archaeon ADurb1213_Bin02801, Arc I group archaeon B03fssc0709_Meth_Bin005, Arc I group archaeon B15fssc0709_Meth_Bin003, Arc I group archaeon BMIXfssc0709_Meth_Bin006, Arc I group archaeon U1lsi0528_Bin055, Arc I group archaeon U1lsi0528_Bin089, C. Methanofastidiosum methylthiophilus, Ca. Methanofastidiosum methylthiophilus, Candidatus Methanofastidiosum methylthiophilus, WSA2 group archaeon U1lsi0528_Bin055, WSA2 group archaeon U1lsi0528_Bin089
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.