STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CJ235_10095Unannotated protein. (100 aa)    
Predicted Functional Partners:
pcrB
Unannotated protein; Prenyltransferase that catalyzes in vivo the transfer of the heptaprenyl moiety of heptaprenyl pyrophosphate (HepPP; 35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond- formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales.
 
     0.830
CJ235_10100
Unannotated protein; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
       0.805
ligA
Unannotated protein; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.
       0.794
pcrA
Unannotated protein.
       0.794
CJ235_10075
Unannotated protein.
       0.790
CJ235_00060
Unannotated protein.
  
     0.488
CJ235_10110
Unannotated protein.
       0.446
Your Current Organism:
Staphylococcus pettenkoferi
NCBI taxonomy Id: 170573
Other names: CCUG 51270, CIP 107711, DSM 19554, S. pettenkoferi, Staphylococcus pettenkoferi Trulzsch et al. 2007, Staphylococcus sp. B3117, strain B3117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.