STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001076995_00311Unannotated protein. (102 aa)    
Predicted Functional Partners:
CJ235_08760
Unannotated protein.
 
     0.812
GCA_001076995_00312
Unannotated protein.
       0.473
CJ235_08530
Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
    0.437
CJ235_06400
Unannotated protein; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
 
     0.418
Your Current Organism:
Staphylococcus pettenkoferi
NCBI taxonomy Id: 170573
Other names: CCUG 51270, CIP 107711, DSM 19554, S. pettenkoferi, Staphylococcus pettenkoferi Trulzsch et al. 2007, Staphylococcus sp. B3117, strain B3117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.