STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spoVGUnannotated protein; Could be involved in septation. (109 aa)    
Predicted Functional Partners:
CJ235_11570
Unannotated protein.
     
 0.850
CJ235_11575
Unannotated protein.
     
 0.826
CJ235_11580
Unannotated protein; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol; Belongs to the GHMP kinase family. IspE subfamily.
       0.628
pth
Unannotated protein; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
 
   
 0.521
CJ235_11650
Unannotated protein.
 
     0.438
Your Current Organism:
Staphylococcus pettenkoferi
NCBI taxonomy Id: 170573
Other names: CCUG 51270, CIP 107711, DSM 19554, S. pettenkoferi, Staphylococcus pettenkoferi Trulzsch et al. 2007, Staphylococcus sp. B3117, strain B3117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.