Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CJ235_01120 | CJ235_08415 | GCA_001076995_02322 | GCA_001076995_00714 | Unannotated protein. | Unannotated protein. | 0.480 |
CJ235_08410 | CJ235_08415 | GCA_001076995_00713 | GCA_001076995_00714 | Unannotated protein. | Unannotated protein. | 0.788 |
CJ235_08410 | putP | GCA_001076995_00713 | GCA_001076995_00715 | Unannotated protein. | Unannotated protein; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.425 |
CJ235_08415 | CJ235_01120 | GCA_001076995_00714 | GCA_001076995_02322 | Unannotated protein. | Unannotated protein. | 0.480 |
CJ235_08415 | CJ235_08410 | GCA_001076995_00714 | GCA_001076995_00713 | Unannotated protein. | Unannotated protein. | 0.788 |
CJ235_08415 | CJ235_09450 | GCA_001076995_00714 | GCA_001076995_02089 | Unannotated protein. | Unannotated protein. | 0.617 |
CJ235_08415 | CJ235_10205 | GCA_001076995_00714 | GCA_001076995_00176 | Unannotated protein. | Unannotated protein. | 0.740 |
CJ235_08415 | atpA | GCA_001076995_00714 | GCA_001076995_01356 | Unannotated protein. | Unannotated protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.483 |
CJ235_08415 | atpC | GCA_001076995_00714 | GCA_001076995_01359 | Unannotated protein. | Unannotated protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.486 |
CJ235_08415 | atpD | GCA_001076995_00714 | GCA_001076995_01358 | Unannotated protein. | Unannotated protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.492 |
CJ235_08415 | atpG | GCA_001076995_00714 | GCA_001076995_01357 | Unannotated protein. | Unannotated protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.493 |
CJ235_08415 | atpH | GCA_001076995_00714 | GCA_001076995_01355 | Unannotated protein. | Unannotated protein; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.420 |
CJ235_08415 | putP | GCA_001076995_00714 | GCA_001076995_00715 | Unannotated protein. | Unannotated protein; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.470 |
CJ235_09450 | CJ235_08415 | GCA_001076995_02089 | GCA_001076995_00714 | Unannotated protein. | Unannotated protein. | 0.617 |
CJ235_10205 | CJ235_08415 | GCA_001076995_00176 | GCA_001076995_00714 | Unannotated protein. | Unannotated protein. | 0.740 |
atpA | CJ235_08415 | GCA_001076995_01356 | GCA_001076995_00714 | Unannotated protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | Unannotated protein. | 0.483 |
atpA | atpC | GCA_001076995_01356 | GCA_001076995_01359 | Unannotated protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | Unannotated protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.999 |
atpA | atpD | GCA_001076995_01356 | GCA_001076995_01358 | Unannotated protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | Unannotated protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.999 |
atpA | atpG | GCA_001076995_01356 | GCA_001076995_01357 | Unannotated protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | Unannotated protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.999 |
atpA | atpH | GCA_001076995_01356 | GCA_001076995_01355 | Unannotated protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | Unannotated protein; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.999 |
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