STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CJ235_04855Unannotated protein. (744 aa)    
Predicted Functional Partners:
CJ235_04845
Unannotated protein.
  
  
 0.930
CJ235_04860
Unannotated protein.
 
   
 0.920
CJ235_04850
Unannotated protein.
  
    0.919
dprA
Unannotated protein.
 
  
 0.840
CJ235_05070
Unannotated protein.
 
  
 0.833
CJ235_02450
Unannotated protein.
 
  
 0.794
birA
Unannotated protein; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
     
 0.781
CJ235_05065
Unannotated protein.
 
  
 0.776
CJ235_04525
Unannotated protein.
  
  
 0.762
ribBA
Unannotated protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
     
 0.749
Your Current Organism:
Staphylococcus pettenkoferi
NCBI taxonomy Id: 170573
Other names: CCUG 51270, CIP 107711, DSM 19554, S. pettenkoferi, Staphylococcus pettenkoferi Trulzsch et al. 2007, Staphylococcus sp. B3117, strain B3117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.