STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CJ235_07230Unannotated protein; Belongs to the ABC transporter superfamily. (345 aa)    
Predicted Functional Partners:
CJ235_07235
Unannotated protein.
 
 0.991
CJ235_07240
Unannotated protein.
 
 
 0.989
CJ235_00875
Unannotated protein.
 
 0.881
CJ235_00870
Unannotated protein.
 
  
 0.841
CJ235_02975
Unannotated protein.
 
   
0.830
CJ235_00865
Unannotated protein.
 
  
 0.812
modB
Unannotated protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
  
 0.770
CJ235_08860
Unannotated protein.
 
   
0.764
CJ235_02625
Unannotated protein.
 
 
   
0.685
CJ235_08865
Unannotated protein.
 
    
0.669
Your Current Organism:
Staphylococcus pettenkoferi
NCBI taxonomy Id: 170573
Other names: CCUG 51270, CIP 107711, DSM 19554, S. pettenkoferi, Staphylococcus pettenkoferi Trulzsch et al. 2007, Staphylococcus sp. B3117, strain B3117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.