STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI37704.1PKHD-type hydroxylase. (226 aa)    
Predicted Functional Partners:
SEI37695.1
Catecholate siderophore receptor.
  
 0.962
SEI37708.1
Hypothetical protein.
 
 
  0.929
SEJ19289.1
Iron complex outermembrane recepter protein.
 
  
 0.725
SEI69810.1
Iron complex outermembrane recepter protein.
 
    0.687
SEI37686.1
Sulfite reductase (NADPH) flavoprotein alpha-component.
 
   
 0.668
SEJ45406.1
Iron complex outermembrane recepter protein.
 
    0.572
SEI91580.1
Ribbon-helix-helix protein, copG family.
   
 
  0.532
SEI37713.1
4-hydroxymandelate oxidase.
 
  
 0.500
SEJ41261.1
Iron complex outermembrane recepter protein.
 
    0.490
SEI40170.1
Iron complex outermembrane recepter protein.
 
    0.473
Your Current Organism:
Azotobacter beijerinckii
NCBI taxonomy Id: 170623
Other names: A. beijerinckii, ATCC 19360, CIP 106282, DSM 378, JCM 20742, NCAIM B.01800, NRRL B-14367, NRRL B-14640
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.