STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI37858.1Leader peptidase (prepilin peptidase) / N-methyltransferase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. (289 aa)    
Predicted Functional Partners:
SEI37851.1
Type IV pilus assembly protein PilC.
 
  
 0.975
SEI37840.1
Type IV pilus assembly protein PilB.
 
 
 0.926
SEI59821.1
Type II secretion system protein F (GspF).
 
  
 0.888
SEI60446.1
General secretion pathway protein E.
 
 
 0.879
SEI61294.1
General secretion pathway protein E.
 
 
 0.877
SEI49650.1
Pilus retraction ATPase PilT.
 
   
 0.861
SEI58389.1
DNA protecting protein DprA.
  
  
 0.812
SEI49674.1
Twitching motility protein PilU.
  
   
 0.809
SEI60181.1
Twitching motility protein PilU.
  
   
 0.808
SEI65993.1
Competence protein ComEC.
 
  
 0.802
Your Current Organism:
Azotobacter beijerinckii
NCBI taxonomy Id: 170623
Other names: A. beijerinckii, ATCC 19360, CIP 106282, DSM 378, JCM 20742, NCAIM B.01800, NRRL B-14367, NRRL B-14640
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.