STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI38482.1Protein-S-isoprenylcysteine O-methyltransferase Ste14. (153 aa)    
Predicted Functional Partners:
SEI60584.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.792
SEI39417.1
Rhodanese-related sulfurtransferase.
    
 0.724
SEJ27948.1
Rhodanese-related sulfurtransferase.
    
 0.724
SEI44914.1
Thiosulfate sulfurtransferase; Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide.
   
 0.626
SEI75447.1
FOG: Ankyrin repeat; Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide.
   
 0.626
radA
DNA replication and repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.
       0.620
SEI38505.1
Hypothetical protein.
 
     0.577
htpX
Heat shock protein HtpX; Belongs to the peptidase M48B family.
    
 0.564
nudC
NAD+ diphosphatase; Belongs to the Nudix hydrolase family. NudC subfamily.
    
 0.470
SEJ21153.1
Cytochrome P450.
    
  0.466
Your Current Organism:
Azotobacter beijerinckii
NCBI taxonomy Id: 170623
Other names: A. beijerinckii, ATCC 19360, CIP 106282, DSM 378, JCM 20742, NCAIM B.01800, NRRL B-14367, NRRL B-14640
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.