STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI46722.1Type VI secretion system protein ImpK. (444 aa)    
Predicted Functional Partners:
SEI46742.1
Type VI secretion system protein VasD.
 
  
 0.996
SEI46702.1
Type VI secretion system protein ImpM.
 
  
 0.994
SEI46711.1
Type VI secretion system protein ImpL.
 
 
 0.994
SEI46732.1
Type VI secretion system protein ImpJ.
  
 0.994
SEI46773.1
Type VI secretion system protein ImpB.
 
  
 0.991
SEI46783.1
Type VI secretion system protein ImpC.
 
  
 0.991
SEI46804.1
Type VI secretion system protein ImpE.
 
  
 0.986
SEI46828.1
Type VI secretion system protein ImpG.
 
  
 0.983
SEI46855.1
Type VI secretion system secreted protein VgrG.
 
  
 0.981
SEI46817.1
Type VI secretion system protein ImpF.
 
  
 0.980
Your Current Organism:
Azotobacter beijerinckii
NCBI taxonomy Id: 170623
Other names: A. beijerinckii, ATCC 19360, CIP 106282, DSM 378, JCM 20742, NCAIM B.01800, NRRL B-14367, NRRL B-14640
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.