Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SEI47358.1 | SEI47363.1 | SAMN04244579_00699 | SAMN04244579_00701 | Putative hydrolase of the HAD superfamily. | Hypothetical protein. | 0.812 |
| SEI47358.1 | SEI47368.1 | SAMN04244579_00699 | SAMN04244579_00704 | Putative hydrolase of the HAD superfamily. | Lipoprotein-attachment site-containing protein. | 0.616 |
| SEI47358.1 | dapF | SAMN04244579_00699 | SAMN04244579_00702 | Putative hydrolase of the HAD superfamily. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.787 |
| SEI47358.1 | lysA | SAMN04244579_00699 | SAMN04244579_00703 | Putative hydrolase of the HAD superfamily. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.757 |
| SEI47358.1 | xerC | SAMN04244579_00699 | SAMN04244579_00700 | Putative hydrolase of the HAD superfamily. | Integrase/recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.813 |
| SEI47363.1 | SEI47358.1 | SAMN04244579_00701 | SAMN04244579_00699 | Hypothetical protein. | Putative hydrolase of the HAD superfamily. | 0.812 |
| SEI47363.1 | SEI47368.1 | SAMN04244579_00701 | SAMN04244579_00704 | Hypothetical protein. | Lipoprotein-attachment site-containing protein. | 0.634 |
| SEI47363.1 | dapF | SAMN04244579_00701 | SAMN04244579_00702 | Hypothetical protein. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.972 |
| SEI47363.1 | lysA | SAMN04244579_00701 | SAMN04244579_00703 | Hypothetical protein. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.763 |
| SEI47363.1 | xerC | SAMN04244579_00701 | SAMN04244579_00700 | Hypothetical protein. | Integrase/recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.897 |
| SEI47368.1 | SEI47358.1 | SAMN04244579_00704 | SAMN04244579_00699 | Lipoprotein-attachment site-containing protein. | Putative hydrolase of the HAD superfamily. | 0.616 |
| SEI47368.1 | SEI47363.1 | SAMN04244579_00704 | SAMN04244579_00701 | Lipoprotein-attachment site-containing protein. | Hypothetical protein. | 0.634 |
| SEI47368.1 | dapF | SAMN04244579_00704 | SAMN04244579_00702 | Lipoprotein-attachment site-containing protein. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.670 |
| SEI47368.1 | lysA | SAMN04244579_00704 | SAMN04244579_00703 | Lipoprotein-attachment site-containing protein. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.645 |
| SEI47368.1 | xerC | SAMN04244579_00704 | SAMN04244579_00700 | Lipoprotein-attachment site-containing protein. | Integrase/recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.647 |
| SEI57919.1 | SEJ10730.1 | SAMN04244579_01220 | SAMN04244579_03137 | Chromosome segregation ATPase. | DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family. | 0.729 |
| SEI57919.1 | SEJ45010.1 | SAMN04244579_01220 | SAMN04244579_04434 | Chromosome segregation ATPase. | ParB family protein; Belongs to the ParB family. | 0.905 |
| SEI57919.1 | SEJ57675.1 | SAMN04244579_01220 | SAMN04244579_04838 | Chromosome segregation ATPase. | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | 0.470 |
| SEI57919.1 | xerC | SAMN04244579_01220 | SAMN04244579_00700 | Chromosome segregation ATPase. | Integrase/recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.590 |
| SEJ10730.1 | SEI57919.1 | SAMN04244579_03137 | SAMN04244579_01220 | DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family. | Chromosome segregation ATPase. | 0.729 |
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