Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEI40565.1 | SEI49713.1 | SAMN04244579_00279 | SAMN04244579_00850 | Xanthine permease XanP. | Dihydroorotase. | 0.886 |
SEI40565.1 | SEI49746.1 | SAMN04244579_00279 | SAMN04244579_00852 | Xanthine permease XanP. | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | 0.839 |
SEI40565.1 | SEI89375.1 | SAMN04244579_00279 | SAMN04244579_02375 | Xanthine permease XanP. | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | 0.839 |
SEI40565.1 | pyrB | SAMN04244579_00279 | SAMN04244579_00851 | Xanthine permease XanP. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.910 |
SEI40565.1 | pyrE | SAMN04244579_00279 | SAMN04244579_00827 | Xanthine permease XanP. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.872 |
SEI40565.1 | pyrF | SAMN04244579_00279 | SAMN04244579_03326 | Xanthine permease XanP. | Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.885 |
SEI40565.1 | upp | SAMN04244579_00279 | SAMN04244579_02638 | Xanthine permease XanP. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.601 |
SEI45952.1 | SEI49746.1 | SAMN04244579_00577 | SAMN04244579_00852 | Cytosine deaminase. | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | 0.929 |
SEI45952.1 | upp | SAMN04244579_00577 | SAMN04244579_02638 | Cytosine deaminase. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.955 |
SEI49713.1 | SEI40565.1 | SAMN04244579_00850 | SAMN04244579_00279 | Dihydroorotase. | Xanthine permease XanP. | 0.886 |
SEI49713.1 | SEI49746.1 | SAMN04244579_00850 | SAMN04244579_00852 | Dihydroorotase. | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | 0.996 |
SEI49713.1 | SEI89375.1 | SAMN04244579_00850 | SAMN04244579_02375 | Dihydroorotase. | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | 0.932 |
SEI49713.1 | pyrB | SAMN04244579_00850 | SAMN04244579_00851 | Dihydroorotase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.999 |
SEI49713.1 | pyrE | SAMN04244579_00850 | SAMN04244579_00827 | Dihydroorotase. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.945 |
SEI49713.1 | pyrF | SAMN04244579_00850 | SAMN04244579_03326 | Dihydroorotase. | Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.941 |
SEI49746.1 | SEI40565.1 | SAMN04244579_00852 | SAMN04244579_00279 | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | Xanthine permease XanP. | 0.839 |
SEI49746.1 | SEI45952.1 | SAMN04244579_00852 | SAMN04244579_00577 | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | Cytosine deaminase. | 0.929 |
SEI49746.1 | SEI49713.1 | SAMN04244579_00852 | SAMN04244579_00850 | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | Dihydroorotase. | 0.996 |
SEI49746.1 | SEI89375.1 | SAMN04244579_00852 | SAMN04244579_02375 | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | 0.875 |
SEI49746.1 | SEJ10100.1 | SAMN04244579_00852 | SAMN04244579_03124 | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase. | ATP diphosphatase. | 0.926 |
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