STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI55561.1Pterin-4-alpha-carbinolamine dehydratase. (118 aa)    
Predicted Functional Partners:
SEI55575.1
Phenylalanine 4-hydroxylase.
 
 0.996
SEJ11118.1
Dihydropteridine reductase.
  
 
  0.730
hmgA
Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate.
  
  
 0.702
SEI55442.1
4-hydroxyphenylpyruvate dioxygenase.
  
  
 0.682
SEI67581.1
4-hydroxyphenylpyruvate dioxygenase.
  
  
 0.682
SEI70130.1
Aromatic-amino-acid transaminase.
  
  
 0.630
SEI67537.1
Fumarylacetoacetate hydrolase.
  
  
 0.575
SEJ21158.1
Ferredoxin-NADP reductase.
  
 
 0.517
SEJ09375.1
4-hydroxyphenylpyruvate dioxygenase.
  
  
 0.493
SEI55547.1
Predicted arabinose efflux permease, MFS family.
       0.482
Your Current Organism:
Azotobacter beijerinckii
NCBI taxonomy Id: 170623
Other names: A. beijerinckii, ATCC 19360, CIP 106282, DSM 378, JCM 20742, NCAIM B.01800, NRRL B-14367, NRRL B-14640
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