STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI60402.1Type II secretion system (T2SS), protein M subtype b. (182 aa)    
Predicted Functional Partners:
SEI78205.1
Type IV pilus assembly protein PilN.
  
 
 0.944
SEI60369.1
General secretion pathway protein D; Belongs to the bacterial secretin family.
  
 
 0.935
SEI78171.1
Type IV pilus assembly protein PilP.
  
 
 0.909
SEI60446.1
General secretion pathway protein E.
  
 
 0.906
SEI60351.1
General secretion pathway protein G.
  
  
 0.806
SEI60318.1
Type II secretory pathway, pseudopilin PulG.
  
  
 0.805
SEI60414.1
Hypothetical protein.
  
    0.798
SEI60430.1
Hypothetical protein.
       0.797
SEI60338.1
General secretion pathway protein G.
  
  
 0.796
SEI78223.1
Type IV pilus assembly protein PilM.
  
 
 0.789
Your Current Organism:
Azotobacter beijerinckii
NCBI taxonomy Id: 170623
Other names: A. beijerinckii, ATCC 19360, CIP 106282, DSM 378, JCM 20742, NCAIM B.01800, NRRL B-14367, NRRL B-14640
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