STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI63965.1NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (254 aa)    
Predicted Functional Partners:
SEJ37449.1
Nucleoside-diphosphate-sugar epimerase.
 
 
  0.864
SEI40726.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.852
SEJ40835.1
Glucose 1-dehydrogenase.
 
 
  0.745
SEI63985.1
Fumarylpyruvate hydrolase.
  
 
  0.716
SEI97716.1
Enoyl-(Acyl carrier protein) reductase.
 
 
  0.709
SEI63950.1
Lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.658
SEJ46658.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
 
  0.548
SEJ44075.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
 
  0.527
SEI69913.1
FAD binding domain-containing protein.
  
 
  0.494
SEI69876.1
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit.
  
 
  0.492
Your Current Organism:
Azotobacter beijerinckii
NCBI taxonomy Id: 170623
Other names: A. beijerinckii, ATCC 19360, CIP 106282, DSM 378, JCM 20742, NCAIM B.01800, NRRL B-14367, NRRL B-14640
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.