STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI68816.1Putative transposase. (383 aa)    
Predicted Functional Partners:
SEI68795.1
Putative transposase.
 
    0.810
SEJ14537.1
Helix-turn-helix domain-containing protein.
  
     0.758
SEJ30364.1
DNA binding domain-containing protein, excisionase family.
 
    0.686
SEI40917.1
DNA binding domain-containing protein, excisionase family.
 
    0.685
SEJ60461.1
Helix-turn-helix domain-containing protein.
  
     0.662
SEJ50449.1
Putative transposase.
 
    0.625
SEJ63081.1
Probable transposase.
  
     0.621
SEJ63575.1
Transposase.
  
 
   0.468
Your Current Organism:
Azotobacter beijerinckii
NCBI taxonomy Id: 170623
Other names: A. beijerinckii, ATCC 19360, CIP 106282, DSM 378, JCM 20742, NCAIM B.01800, NRRL B-14367, NRRL B-14640
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.