STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI78154.1Type IV pilus assembly protein PilQ. (711 aa)    
Predicted Functional Partners:
SEI78171.1
Type IV pilus assembly protein PilP.
 
 
 0.998
SEI78205.1
Type IV pilus assembly protein PilN.
 
 
 0.997
SEI78223.1
Type IV pilus assembly protein PilM.
 
 
 0.994
SEI78191.1
Type IV pilus assembly protein PilO.
 
 
 0.991
SEI58365.1
Nucleoid-associated protein YgaU, contains BON and LysM domains.
 
 
 
 0.984
SEI37851.1
Type IV pilus assembly protein PilC.
 
 
 
 0.902
SEI37840.1
Type IV pilus assembly protein PilB.
 
 
 
 0.863
SEI38134.1
Type IV pilus assembly protein PilE.
 
   
 0.806
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
    
 0.787
SEI61294.1
General secretion pathway protein E.
 
 
 
 0.777
Your Current Organism:
Azotobacter beijerinckii
NCBI taxonomy Id: 170623
Other names: A. beijerinckii, ATCC 19360, CIP 106282, DSM 378, JCM 20742, NCAIM B.01800, NRRL B-14367, NRRL B-14640
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.