STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI83560.1Lysozyme. (155 aa)    
Predicted Functional Partners:
SEI83629.1
Phage head completion protein (GPL).
 
    0.892
SEI83492.1
Phage lysis regulatory protein, LysB family.
  
    0.886
SEI83602.1
P2-like prophage tail protein X.
 
    0.884
SEI83679.1
Phage major capsid protein, P2 family.
 
    0.808
SEI83653.1
Phage small terminase subunit.
 
    0.802
SEI83709.1
Phage capsid scaffolding protein (GPO) serine peptidase.
 
    0.787
SEI83575.1
Phage holin T7 family, holin superfamily II.
       0.773
SEI83443.1
P2 phage tail completion protein R (GpR).
  
    0.762
SEI83413.1
Phage virion morphogenesis (putative tail completion) protein.
  
    0.738
SEI83756.1
Phage portal protein, PBSX family.
 
    0.734
Your Current Organism:
Azotobacter beijerinckii
NCBI taxonomy Id: 170623
Other names: A. beijerinckii, ATCC 19360, CIP 106282, DSM 378, JCM 20742, NCAIM B.01800, NRRL B-14367, NRRL B-14640
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