STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI90351.1Prophage minor tail protein Z (GPZ). (203 aa)    
Predicted Functional Partners:
SEI90403.1
Phage major capsid protein E.
       0.787
SEI90336.1
Hypothetical protein.
       0.773
SEI90373.1
Hypothetical protein.
       0.773
SEI90310.1
Hypothetical protein.
       0.752
SEI90479.1
Phage portal protein, lambda family.
  
    0.707
SEI90454.1
Protein C Serine peptidase. MEROPS family S49.
  
    0.632
SEI90428.1
Bacteriophage lambda head decoration protein D.
  
    0.618
SEI90526.1
Phage terminase, large subunit GpA.
  
    0.617
SEI90555.1
Protein of unknown function.
  
    0.615
SEI90501.1
gpW protein.
       0.560
Your Current Organism:
Azotobacter beijerinckii
NCBI taxonomy Id: 170623
Other names: A. beijerinckii, ATCC 19360, CIP 106282, DSM 378, JCM 20742, NCAIM B.01800, NRRL B-14367, NRRL B-14640
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.