STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI93024.1Hypothetical protein. (187 aa)    
Predicted Functional Partners:
SEI93043.1
SIR2-like domain-containing protein.
 
     0.930
SEI93127.1
Nitrogen fixation protein NifT.
 
     0.776
SEI44742.1
Nitrogen fixation protein NifX.
 
     0.771
SEI93620.1
Hypothetical protein.
  
     0.769
SEI93662.1
Nitrogen fixation protein NifZ.
  
     0.767
SEI93147.1
Nitrogen fixation protein NifX.
 
     0.764
SEI44841.1
Nitrogen fixation negative regulator NifL.
  
     0.759
SEI93189.1
Leucine rich repeat variant.
 
     0.758
SEJ18992.1
Hemerythrin-like metal-binding domain protein.
 
     0.743
SEI93259.1
Nitrogen fixation protein NifX.
  
     0.730
Your Current Organism:
Azotobacter beijerinckii
NCBI taxonomy Id: 170623
Other names: A. beijerinckii, ATCC 19360, CIP 106282, DSM 378, JCM 20742, NCAIM B.01800, NRRL B-14367, NRRL B-14640
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.